Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Snord88a-201ENSMUST00000116723 90 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Gm12040-201ENSMUST00000118357 537 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Gm24359-201ENSMUST00000158418 221 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Gm8275-201ENSMUST00000219732 424 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm13423-201ENSMUST00000117205 888 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm29141-201ENSMUST00000190357 882 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm43383-201ENSMUST00000195981 469 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm29778-201ENSMUST00000201667 466 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm6070-201ENSMUST00000207275 419 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm4796-201ENSMUST00000219802 624 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm19011-201ENSMUST00000221777 808 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm33312-201ENSMUST00000222443 332 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Mir455-201ENSMUST00000093594 82 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Ccdc28aQ8CEI3 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm24888-201ENSMUST00000104387 130 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm4785-201ENSMUST00000191025 751 ntBASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Ccdc28aQ8CEI3 Gm45279-201ENSMUST00000210315 391 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms