Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm15081-201ENSMUST00000119794 844 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm14900-201ENSMUST00000120304 733 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm7113-201ENSMUST00000120477 958 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm6451-201ENSMUST00000121488 717 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm25057-201ENSMUST00000157366 88 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm26183-201ENSMUST00000157685 139 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Pea15b-201ENSMUST00000182806 387 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm27684-201ENSMUST00000183778 80 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Mir6922-201ENSMUST00000185099 66 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm18558-201ENSMUST00000186253 1214 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm37585-201ENSMUST00000195440 280 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm23604-202ENSMUST00000198428 137 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm44582-201ENSMUST00000209125 445 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm7780-201ENSMUST00000214787 406 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm46203-201ENSMUST00000218130 478 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm14729-201ENSMUST00000118373 689 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm13604-201ENSMUST00000119332 482 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm12459-201ENSMUST00000120659 356 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm14038-201ENSMUST00000121500 807 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm22523-201ENSMUST00000158696 100 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Mir1930-201ENSMUST00000158799 84 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm17047-201ENSMUST00000167709 430 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm20691-201ENSMUST00000176889 333 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm20615-201ENSMUST00000177503 705 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm19124-201ENSMUST00000191041 832 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm38373-201ENSMUST00000192042 288 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm43147-201ENSMUST00000196944 542 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm8454-201ENSMUST00000196980 811 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm7463-201ENSMUST00000201541 547 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm43812-202ENSMUST00000202701 581 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm24451-201ENSMUST00000083353 133 ntBASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.41□□□□□ -1.38
Ccdc28bQ8CEG5 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms