Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm13455-201ENSMUST00000118767 517 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm26037-201ENSMUST00000158150 311 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm23762-201ENSMUST00000158348 106 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm5871-201ENSMUST00000176461 718 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm37103-201ENSMUST00000191830 115 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm5853-201ENSMUST00000197183 632 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trub1Q8C0D0 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.66□□□□□ -1.34
Trub1Q8C0D0 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm16073-201ENSMUST00000116032 517 ntBASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm3140-201ENSMUST00000163523 481 ntBASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm7769-201ENSMUST00000212900 933 ntBASIC6.66□□□□□ -1.34
Trub1Q8C0D0 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trub1Q8C0D0 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Trub1Q8C0D0 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms