Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 AC122828.2-201ENSMUST00000222511 2880 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm4997-201ENSMUST00000154056 360 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm25722-201ENSMUST00000157498 279 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm22261-201ENSMUST00000158691 324 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm5692-201ENSMUST00000187254 1057 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm8009-201ENSMUST00000191672 436 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm17824-201ENSMUST00000197690 805 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm18839-201ENSMUST00000204292 670 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 AC123832.2-201ENSMUST00000215151 129 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 AC134537.2-201ENSMUST00000217770 575 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm46192-201ENSMUST00000217894 326 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm18592-201ENSMUST00000221529 276 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Rybp-ps-201ENSMUST00000069489 681 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm5949-201ENSMUST00000213468 1421 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.69□□□□□ -1.02
Sf3b2Q3UJB0 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm25459-201ENSMUST00000157953 114 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm25906-201ENSMUST00000158489 126 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm37609-201ENSMUST00000191778 678 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm37328-201ENSMUST00000193191 640 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm45122-201ENSMUST00000206376 784 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm45850-201ENSMUST00000212536 338 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm24454-201ENSMUST00000083349 132 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm43335-201ENSMUST00000198299 3276 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sf3b2Q3UJB0 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Sf3b2Q3UJB0 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Sf3b2Q3UJB0 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3b2Q3UJB0 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Sf3b2Q3UJB0 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
Sf3b2Q3UJB0 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms