Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm23058-201ENSMUST00000093703 107 ntBASIC7.69□□□□□ -1.18
Hmgb1P63158 Gm17199-201ENSMUST00000097296 416 ntBASIC7.69□□□□□ -1.18
Hmgb1P63158 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hmgb1P63158 Gm45657-201ENSMUST00000211318 1349 ntBASIC7.69□□□□□ -1.18
Hmgb1P63158 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hmgb1P63158 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hmgb1P63158 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Hmgb1P63158 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.69□□□□□ -1.18
Hmgb1P63158 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Hmgb1P63158 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hmgb1P63158 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm13414-201ENSMUST00000117516 727 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm14621-201ENSMUST00000117709 689 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm14796-201ENSMUST00000121216 959 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm23426-201ENSMUST00000122483 318 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm18349-201ENSMUST00000187440 904 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm36997-201ENSMUST00000195090 707 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm3511-201ENSMUST00000199823 204 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm6230-201ENSMUST00000208077 780 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm46231-201ENSMUST00000220152 314 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm6990-201ENSMUST00000086830 348 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.68□□□□□ -1.18
Hmgb1P63158 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Hmgb1P63158 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.68□□□□□ -1.18
Hmgb1P63158 Gm43831-201ENSMUST00000200461 2598 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm23485-201ENSMUST00000104181 155 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm8421-201ENSMUST00000119439 305 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm11965-201ENSMUST00000122017 277 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 n-R5s24-201ENSMUST00000122518 117 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm22158-201ENSMUST00000158411 126 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm24228-201ENSMUST00000158829 129 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Hmgb1P63158 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm20813-201ENSMUST00000186646 705 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm28859-201ENSMUST00000186650 616 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm28573-201ENSMUST00000187821 380 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm21923-201ENSMUST00000188455 696 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm20932-201ENSMUST00000189115 694 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Gm28400-201ENSMUST00000191332 380 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Hmgb1P63158 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Hmgb1P63158 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Hmgb1P63158 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.67□□□□□ -1.18
Hmgb1P63158 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms