Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.5□□□□□ -1.37
Fdft1P53798 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Fdft1P53798 Gm5456-201ENSMUST00000170706 844 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 Gm17045-201ENSMUST00000178600 844 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Fdft1P53798 Mir7005-201ENSMUST00000185089 69 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Fdft1P53798 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.5□□□□□ -1.37
Fdft1P53798 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.5□□□□□ -1.37
Fdft1P53798 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 Gm17997-201ENSMUST00000211801 840 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.5□□□□□ -1.37
Fdft1P53798 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Fdft1P53798 Mir106b-201ENSMUST00000083580 82 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Fdft1P53798 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Fdft1P53798 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.5□□□□□ -1.37
Fdft1P53798 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Fdft1P53798 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Fdft1P53798 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Fdft1P53798 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Fdft1P53798 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Fdft1P53798 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Fdft1P53798 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm24869-201ENSMUST00000104072 128 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.49□□□□□ -1.37
Fdft1P53798 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm26381-201ENSMUST00000174895 92 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm22990-201ENSMUST00000175427 89 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.49□□□□□ -1.37
Fdft1P53798 Gm26587-201ENSMUST00000180795 989 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Fdft1P53798 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm27156-201ENSMUST00000184589 754 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.49□□□□□ -1.37
Fdft1P53798 Gm28846-201ENSMUST00000189161 368 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm7463-201ENSMUST00000201541 547 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm3549-201ENSMUST00000203873 794 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm6681-201ENSMUST00000205215 607 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.49□□□□□ -1.37
Fdft1P53798 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Gm19007-201ENSMUST00000217746 874 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm18040-201ENSMUST00000217922 827 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Gm9985-201ENSMUST00000044101 510 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Fdft1P53798 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Fdft1P53798 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Fdft1P53798 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.49□□□□□ -1.37
Fdft1P53798 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Fdft1P53798 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.49□□□□□ -1.37
Fdft1P53798 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Fdft1P53798 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Fdft1P53798 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Fdft1P53798 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.48□□□□□ -1.37
Fdft1P53798 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm14513-201ENSMUST00000117403 123 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm13732-201ENSMUST00000117753 535 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm16044-201ENSMUST00000118475 450 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm12229-201ENSMUST00000120487 468 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm14038-201ENSMUST00000121500 807 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm22820-201ENSMUST00000157205 329 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm26486-201ENSMUST00000158021 110 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Gm8715-201ENSMUST00000162728 531 ntBASIC6.48□□□□□ -1.37
Fdft1P53798 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Fdft1P53798 Gm20432-201ENSMUST00000173716 250 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms