Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm8895-201ENSMUST00000172300 1223 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm24307-201ENSMUST00000178512 101 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Rfx1P48377 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm20587-201ENSMUST00000186367 1186 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm28164-201ENSMUST00000190143 442 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm37996-201ENSMUST00000191859 367 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm44181-201ENSMUST00000203106 483 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm31579-201ENSMUST00000203306 966 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm18012-201ENSMUST00000204558 773 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm19134-201ENSMUST00000221203 487 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 AC126939.4-201ENSMUST00000225360 743 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm22053-201ENSMUST00000083394 200 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Rfx1P48377 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm37140-201ENSMUST00000192914 1684 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC8.45□□□□□ -1.06
Rfx1P48377 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Rfx1P48377 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Rfx1P48377 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC8.44□□□□□ -1.06
Rfx1P48377 AC154406.1-201ENSMUST00000215220 2529 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
Rfx1P48377 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Rfx1P48377 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
Rfx1P48377 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC8.44□□□□□ -1.06
Rfx1P48377 H3f3c-201ENSMUST00000119459 411 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm12642-201ENSMUST00000121098 876 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Llph-ps1-201ENSMUST00000121281 390 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm14383-201ENSMUST00000121637 386 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm11575-201ENSMUST00000122243 228 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm24139-201ENSMUST00000122780 288 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm23059-201ENSMUST00000158978 107 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.44□□□□□ -1.06
Rfx1P48377 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm17097-201ENSMUST00000166414 714 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm9890-201ENSMUST00000171867 537 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm6726-201ENSMUST00000172786 681 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm7031-201ENSMUST00000173709 919 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm37173-201ENSMUST00000194498 1017 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm42431-201ENSMUST00000196880 323 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm23011-202ENSMUST00000197855 275 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm43629-201ENSMUST00000201782 704 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm29977-201ENSMUST00000206804 724 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.44□□□□□ -1.06
Rfx1P48377 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm32300-201ENSMUST00000221735 515 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm36758-201ENSMUST00000222594 310 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rfx1P48377 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm9800-201ENSMUST00000052615 336 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC8.44□□□□□ -1.06
Rfx1P48377 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rfx1P48377 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Rfx1P48377 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 AC140280.1-201ENSMUST00000227826 1847 ntBASIC8.44□□□□□ -1.06
Rfx1P48377 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC8.44□□□□□ -1.06
Rfx1P48377 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Rfx1P48377 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Rfx1P48377 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Rfx1P48377 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Rfx1P48377 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Rfx1P48377 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms