Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Cdx2P43241 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.3□□□□□ -1.4
Cdx2P43241 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Cdx2P43241 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm23739-201ENSMUST00000102295 108 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm22371-201ENSMUST00000104588 130 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Gm15781-201ENSMUST00000120216 323 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Gm9428-201ENSMUST00000127214 769 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdx2P43241 Mir7235-201ENSMUST00000183796 56 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Mir7211-201ENSMUST00000184071 63 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm6693-201ENSMUST00000189583 813 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm37380-201ENSMUST00000193752 397 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Gm33178-201ENSMUST00000212090 257 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 AV026068-216ENSMUST00000223874 328 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 AV026068-218ENSMUST00000223980 575 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm26130-201ENSMUST00000083171 138 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Cdx2P43241 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cdx2P43241 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.3□□□□□ -1.4
Cdx2P43241 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Cdx2P43241 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Cdx2P43241 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.3□□□□□ -1.4
Cdx2P43241 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx2P43241 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx2P43241 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdx2P43241 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Cdx2P43241 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Grik1-210ENSMUST00000228034 2708 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm26289-201ENSMUST00000104169 131 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.29□□□□□ -1.4
Cdx2P43241 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm25433-201ENSMUST00000158283 286 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Mir7220-201ENSMUST00000183978 60 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cdx2P43241 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.29□□□□□ -1.4
Cdx2P43241 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 Gm36448-201ENSMUST00000199916 438 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 Gm44360-201ENSMUST00000200081 82 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 Gm44239-201ENSMUST00000204228 271 ntBASIC6.29□□□□□ -1.4
Cdx2P43241 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms