Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm37383-201ENSMUST00000191750 745 ntBASIC6.13□□□□□ -1.43
Sox6P40645 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm18601-201ENSMUST00000220831 634 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Gm9985-201ENSMUST00000044101 510 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 AW822073-201ENSMUST00000075305 555 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox6P40645 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.13□□□□□ -1.43
Sox6P40645 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.12□□□□□ -1.43
Sox6P40645 AU020206-202ENSMUST00000206358 3009 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.12□□□□□ -1.43
Sox6P40645 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Sox6P40645 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm6142-201ENSMUST00000120290 325 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.12□□□□□ -1.43
Sox6P40645 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm24157-201ENSMUST00000175265 111 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.12□□□□□ -1.43
Sox6P40645 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Gm29383-201ENSMUST00000188284 480 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Gm9114-201ENSMUST00000188558 997 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Gm36965-201ENSMUST00000193797 394 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm43141-201ENSMUST00000199695 274 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.12□□□□□ -1.43
Sox6P40645 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Sox6P40645 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.12□□□□□ -1.43
Sox6P40645 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.12□□□□□ -1.43
Sox6P40645 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sox6P40645 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Gm5321-201ENSMUST00000072050 447 ntBASIC6.12□□□□□ -1.43
Sox6P40645 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sox6P40645 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Sox6P40645 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Sox6P40645 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
Sox6P40645 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox6P40645 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sox6P40645 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox6P40645 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox6P40645 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox6P40645 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sox6P40645 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox6P40645 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox6P40645 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox6P40645 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms