Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm22820-201ENSMUST00000157205 329 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm24781-201ENSMUST00000157636 117 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Mir1929-201ENSMUST00000158635 93 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm26025-201ENSMUST00000158655 271 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm20430-201ENSMUST00000172474 207 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Mir8094-201ENSMUST00000183361 117 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm29650-201ENSMUST00000188485 742 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm19185-201ENSMUST00000196365 643 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm30517-201ENSMUST00000197350 772 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm8182-201ENSMUST00000197863 769 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm42887-201ENSMUST00000202469 1119 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm44243-201ENSMUST00000204323 692 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.24□□□□□ -1.57
Hmgb3O54879 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC5.24□□□□□ -1.57
Hmgb3O54879 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 AC127242.3-201ENSMUST00000222009 580 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 AC165157.1-201ENSMUST00000222981 580 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm9293-201ENSMUST00000223096 306 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb3O54879 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb3O54879 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm22470-201ENSMUST00000104117 130 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm11865-201ENSMUST00000118093 859 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm14870-201ENSMUST00000118414 156 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm13604-201ENSMUST00000119332 482 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm14300-201ENSMUST00000120800 946 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm25057-201ENSMUST00000157366 88 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm23822-201ENSMUST00000158739 128 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Hmgb3O54879 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Mir6919-201ENSMUST00000185146 62 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm8506-201ENSMUST00000186661 829 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm6472-202ENSMUST00000187973 582 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm29175-201ENSMUST00000189500 402 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm38291-201ENSMUST00000193671 259 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm34144-201ENSMUST00000197039 259 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm18484-201ENSMUST00000204389 991 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm17997-201ENSMUST00000211801 840 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC5.23□□□□□ -1.57
Hmgb3O54879 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 AC159205.1-201ENSMUST00000225513 1099 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 AC139209.2-201ENSMUST00000227680 1208 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm9788-201ENSMUST00000057038 906 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm21731-201ENSMUST00000079524 489 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Snora9-201ENSMUST00000082579 133 ntBASIC5.23□□□□□ -1.57
Hmgb3O54879 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.23□□□□□ -1.57
Hmgb3O54879 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms