Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm13739-201ENSMUST00000118020 530 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm5387-201ENSMUST00000119776 857 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm6434-201ENSMUST00000163316 372 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm18833-201ENSMUST00000173218 862 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm9504-201ENSMUST00000196322 468 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm18586-201ENSMUST00000217265 518 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm9788-201ENSMUST00000057038 906 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm26422-201ENSMUST00000104276 132 ntBASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm14733-201ENSMUST00000117680 133 ntBASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm5601-201ENSMUST00000118909 972 ntBASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm11689-201ENSMUST00000120766 302 ntBASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm25550-201ENSMUST00000158079 128 ntBASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
H2afb2S4R1M3 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
H2afb2S4R1M3 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms