Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm25093-201ENSMUST00000103993 132 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm2178-201ENSMUST00000104927 357 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm25395-201ENSMUST00000157343 272 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm23031-201ENSMUST00000157998 119 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm6061-201ENSMUST00000175860 492 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm29156-201ENSMUST00000187764 499 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm6077-201ENSMUST00000196008 499 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm34144-201ENSMUST00000197039 259 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm5711-201ENSMUST00000197896 421 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm44253-201ENSMUST00000203387 628 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm44227-201ENSMUST00000203576 241 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm44411-201ENSMUST00000204172 349 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm44487-201ENSMUST00000205145 325 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm12375-201ENSMUST00000119331 921 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm5166-201ENSMUST00000121332 573 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm8577-201ENSMUST00000122420 986 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm25989-201ENSMUST00000158761 133 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm6264-201ENSMUST00000160802 624 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm8609-201ENSMUST00000182967 998 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm28665-201ENSMUST00000189269 670 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm29141-201ENSMUST00000190357 882 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm37620-201ENSMUST00000192910 501 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm19185-201ENSMUST00000196365 643 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm43141-201ENSMUST00000199695 274 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm36448-201ENSMUST00000199916 438 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm4860-201ENSMUST00000200368 454 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm44984-201ENSMUST00000207802 394 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Gm9685-201ENSMUST00000211275 538 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim3Q9R1R2 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 AW822073-201ENSMUST00000075305 555 ntBASIC6.22□□□□□ -1.41
Trim3Q9R1R2 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 131.8 ms