Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm5446-201ENSMUST00000091762 784 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
Lima1Q9ERG0 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm14513-201ENSMUST00000117403 123 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm11858-201ENSMUST00000117935 838 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm13265-201ENSMUST00000118090 421 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm14870-201ENSMUST00000118414 156 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm13604-201ENSMUST00000119332 482 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm13754-201ENSMUST00000120486 998 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm14300-201ENSMUST00000120800 946 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm15316-201ENSMUST00000121082 421 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm24781-201ENSMUST00000157636 117 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm24176-201ENSMUST00000158928 121 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm27360-201ENSMUST00000183487 80 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm27970-201ENSMUST00000184854 407 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28739-201ENSMUST00000185415 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28219-201ENSMUST00000185452 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28542-201ENSMUST00000185545 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28303-201ENSMUST00000185642 747 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29244-201ENSMUST00000185825 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29437-201ENSMUST00000185865 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29412-201ENSMUST00000185869 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28910-201ENSMUST00000185921 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28812-201ENSMUST00000185963 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29468-201ENSMUST00000185978 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28335-201ENSMUST00000186204 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28854-201ENSMUST00000186218 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28636-201ENSMUST00000186353 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28452-201ENSMUST00000186623 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29298-201ENSMUST00000186704 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28185-201ENSMUST00000186815 694 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28227-201ENSMUST00000186862 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28796-201ENSMUST00000186905 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29659-201ENSMUST00000187063 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28473-201ENSMUST00000187325 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28558-201ENSMUST00000187373 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28682-201ENSMUST00000187430 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28738-201ENSMUST00000187480 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28949-201ENSMUST00000187805 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28773-201ENSMUST00000187925 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29319-201ENSMUST00000188060 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29422-201ENSMUST00000188062 694 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28734-201ENSMUST00000188104 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28787-201ENSMUST00000188357 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29312-201ENSMUST00000188724 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29451-201ENSMUST00000188862 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29637-201ENSMUST00000188877 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29033-201ENSMUST00000189114 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29614-201ENSMUST00000189263 694 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm28751-201ENSMUST00000189287 696 ntBASIC6.38□□□□□ -1.39
Lima1Q9ERG0 Gm29559-201ENSMUST00000189412 696 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms