Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm14158-201ENSMUST00000118409 308 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm12451-201ENSMUST00000121636 633 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm20454-201ENSMUST00000172713 221 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Mir6989-201ENSMUST00000184812 65 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm21301-201ENSMUST00000189476 699 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm3841-201ENSMUST00000191399 451 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 AW822073-201ENSMUST00000075305 555 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Cdc40Q9DC48 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.17□□□□□ -1.42
Cdc40Q9DC48 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Mir708-201ENSMUST00000102189 109 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm12842-201ENSMUST00000117298 476 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm14116-201ENSMUST00000117733 805 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm15164-201ENSMUST00000122203 271 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm22311-201ENSMUST00000158006 110 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm24176-201ENSMUST00000158928 121 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Mir7082-201ENSMUST00000183526 92 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm43089-201ENSMUST00000199162 275 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdc40Q9DC48 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm23979-201ENSMUST00000104071 128 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm11553-201ENSMUST00000120682 240 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Mir1953-201ENSMUST00000157866 89 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm25574-201ENSMUST00000175245 249 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm28665-201ENSMUST00000189269 670 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm38068-201ENSMUST00000192546 540 ntBASIC6.15□□□□□ -1.42
Cdc40Q9DC48 Gm36448-201ENSMUST00000199916 438 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms