Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm22116-201ENSMUST00000158791 141 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm23164-201ENSMUST00000175084 111 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Mir6241-201ENSMUST00000184225 103 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm9517-201ENSMUST00000195021 874 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm2142-201ENSMUST00000197899 589 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm8190-201ENSMUST00000199603 586 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm45608-201ENSMUST00000210948 389 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm8275-201ENSMUST00000219732 424 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm7731-201ENSMUST00000091759 470 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm43490-201ENSMUST00000197593 2652 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm9429-201ENSMUST00000117804 868 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm13744-201ENSMUST00000118953 850 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm13118-201ENSMUST00000120402 549 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm11581-201ENSMUST00000122024 763 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Mir1981-201ENSMUST00000157934 82 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm7418-201ENSMUST00000162120 801 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm27014-201ENSMUST00000182658 937 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Mir6398-201ENSMUST00000184541 102 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm37966-201ENSMUST00000193122 326 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm43664-201ENSMUST00000196038 734 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm45042-201ENSMUST00000207377 211 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 AC122901.2-201ENSMUST00000216926 285 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Mir484-201ENSMUST00000093566 67 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Zfp850-201ENSMUST00000099111 941 ntBASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms