Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm12124-201ENSMUST00000120504 679 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm15160-201ENSMUST00000120553 907 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm11259-201ENSMUST00000120554 715 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm24962-201ENSMUST00000157917 109 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm8614-201ENSMUST00000182528 978 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm28724-201ENSMUST00000186149 625 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm38022-201ENSMUST00000191762 403 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm37349-201ENSMUST00000194205 624 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm18635-201ENSMUST00000199020 1060 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm43725-201ENSMUST00000200122 369 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm42965-201ENSMUST00000201254 250 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm44982-201ENSMUST00000208795 471 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 CT030662.1-201ENSMUST00000227380 232 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim11Q99PQ2 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm25725-201ENSMUST00000104528 130 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm2735-201ENSMUST00000136133 277 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm23441-201ENSMUST00000157268 127 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm7991-201ENSMUST00000168668 591 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm7426-201ENSMUST00000179046 404 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm7481-201ENSMUST00000182020 995 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm5181-201ENSMUST00000183140 971 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm27972-201ENSMUST00000184720 137 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Txn-ps1-201ENSMUST00000186385 309 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm29600-201ENSMUST00000188687 377 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Ighv1-38-201ENSMUST00000192755 349 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm2505-201ENSMUST00000200413 825 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm7492-201ENSMUST00000201745 725 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm43090-201ENSMUST00000202459 314 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm44833-201ENSMUST00000208368 331 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 AL935138.1-201ENSMUST00000215309 196 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 AC157571.1-201ENSMUST00000222014 520 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 AC139569.1-201ENSMUST00000226080 614 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 AC156790.3-201ENSMUST00000226200 254 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm9800-201ENSMUST00000052615 336 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm22865-201ENSMUST00000083949 214 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim11Q99PQ2 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms