Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm29464-201ENSMUST00000187692 513 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm38079-201ENSMUST00000195603 154 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm43491-201ENSMUST00000197133 784 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm23011-202ENSMUST00000197855 275 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm5154-201ENSMUST00000203971 399 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm34424-201ENSMUST00000213400 782 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm19007-201ENSMUST00000217746 874 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 AC159293.2-201ENSMUST00000222289 424 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 AC154245.1-201ENSMUST00000224615 601 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim8Q99PJ2 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm15160-201ENSMUST00000120553 907 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm15534-201ENSMUST00000137642 562 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm7289-201ENSMUST00000168993 734 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm28335-201ENSMUST00000186204 696 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm28558-201ENSMUST00000187373 696 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm28734-201ENSMUST00000188104 696 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm28968-201ENSMUST00000190413 696 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm38229-201ENSMUST00000191931 696 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm38121-201ENSMUST00000193213 696 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm37991-201ENSMUST00000194297 696 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm38035-201ENSMUST00000194427 696 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm38350-201ENSMUST00000194789 696 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm43295-201ENSMUST00000201439 412 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm8921-201ENSMUST00000204306 649 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm7419-201ENSMUST00000209962 925 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim8Q99PJ2 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms