Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm18833-201ENSMUST00000173218 862 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm37380-201ENSMUST00000193752 397 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm44342-201ENSMUST00000196874 129 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm44383-201ENSMUST00000198940 129 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm13988-201ENSMUST00000119363 288 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm14614-201ENSMUST00000119873 384 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm22702-201ENSMUST00000175372 69 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm28006-201ENSMUST00000183841 122 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm6197-201ENSMUST00000192273 454 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm37511-201ENSMUST00000192901 294 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm8860-201ENSMUST00000193160 445 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm44265-201ENSMUST00000203631 465 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm6885-201ENSMUST00000217261 372 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm25189-201ENSMUST00000083911 164 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ccdc28aQ8CEI3 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Mir674-201ENSMUST00000102421 100 ntBASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc28aQ8CEI3 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms