Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm9367-201ENSMUST00000205703 546 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm22267-201ENSMUST00000104008 131 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm13176-201ENSMUST00000117910 477 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm4992-201ENSMUST00000120256 768 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm25574-201ENSMUST00000175245 249 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 AW822073-201ENSMUST00000075305 555 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Gm22581-201ENSMUST00000083735 136 ntBASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Nup88Q8CEC0 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm15311-201ENSMUST00000119682 282 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm15305-201ENSMUST00000120354 288 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm11498-201ENSMUST00000120660 949 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm11581-201ENSMUST00000122024 763 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm14747-201ENSMUST00000149888 984 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm28846-201ENSMUST00000189161 368 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm21301-201ENSMUST00000189476 699 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm43033-201ENSMUST00000199682 425 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm45122-201ENSMUST00000206376 784 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm17950-201ENSMUST00000214617 646 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Nup88Q8CEC0 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms