Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 AC163032.1-201ENSMUST00000220671 2970 ntBASIC7.08□□□□□ -1.28
Trim17Q7TPM3 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.08□□□□□ -1.28
Trim17Q7TPM3 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm24069-201ENSMUST00000104512 127 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm11343-201ENSMUST00000120579 599 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm15618-201ENSMUST00000121610 452 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm18006-201ENSMUST00000177411 662 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm26729-201ENSMUST00000180744 352 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm38237-201ENSMUST00000193366 376 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm6077-201ENSMUST00000196008 499 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm5154-201ENSMUST00000203971 399 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm44943-201ENSMUST00000207254 300 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Snora21-201ENSMUST00000082967 137 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm24924-201ENSMUST00000084007 164 ntBASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim17Q7TPM3 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm45520-201ENSMUST00000210109 2031 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm4342-201ENSMUST00000118982 367 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm11581-201ENSMUST00000122024 763 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm5125-201ENSMUST00000148614 624 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm24176-201ENSMUST00000158928 121 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm22569-201ENSMUST00000175545 124 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm5244-202ENSMUST00000189517 743 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm7166-201ENSMUST00000199715 303 ntBASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim17Q7TPM3 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms