Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Gm9504-201ENSMUST00000196322 468 ntBASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Gm18838-201ENSMUST00000204855 886 ntBASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Gm18789-201ENSMUST00000216115 550 ntBASIC7.35□□□□□ -1.23
Usp49Q6P9L4 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Mir425-201ENSMUST00000083645 85 ntBASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.35□□□□□ -1.23
Usp49Q6P9L4 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp49Q6P9L4 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm13732-201ENSMUST00000117753 535 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm23071-201ENSMUST00000158242 115 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm3344-201ENSMUST00000169610 603 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm20530-201ENSMUST00000174261 254 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm27295-201ENSMUST00000184264 153 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm38068-201ENSMUST00000192546 540 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm38217-201ENSMUST00000194358 910 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm43576-201ENSMUST00000197937 871 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm45196-201ENSMUST00000206751 825 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm2225-201ENSMUST00000209570 377 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm9788-201ENSMUST00000057038 906 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp49Q6P9L4 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Usp49Q6P9L4 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.34□□□□□ -1.24
Usp49Q6P9L4 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Usp49Q6P9L4 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Usp49Q6P9L4 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm649-201ENSMUST00000117284 1054 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm12939-201ENSMUST00000117303 165 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm12573-201ENSMUST00000118158 286 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm11545-201ENSMUST00000146507 375 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm25057-201ENSMUST00000157366 88 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm10136-201ENSMUST00000183196 435 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Mir6244-201ENSMUST00000184156 117 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm37629-201ENSMUST00000193635 1050 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm8190-201ENSMUST00000199603 586 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm44227-201ENSMUST00000203576 241 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm5324-201ENSMUST00000208115 476 ntBASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp49Q6P9L4 Gm17849-201ENSMUST00000219788 853 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms