Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm12936-201ENSMUST00000121439 301 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PrkdcP97313 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PrkdcP97313 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 AC131795.1-201ENSMUST00000219632 426 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Gm40692-201ENSMUST00000220411 491 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm37109-201ENSMUST00000195475 2254 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm6081-201ENSMUST00000134472 489 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm29197-201ENSMUST00000185922 702 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PrkdcP97313 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm23514-201ENSMUST00000082827 130 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PrkdcP97313 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm12303-201ENSMUST00000119506 673 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm14900-201ENSMUST00000120304 733 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PrkdcP97313 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PrkdcP97313 Mir412-201ENSMUST00000083636 80 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm44750-201ENSMUST00000206185 2223 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm9403-201ENSMUST00000196299 2181 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm44046-201ENSMUST00000203145 2678 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Mir449c-201ENSMUST00000102192 109 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm14106-201ENSMUST00000119382 438 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.32□□□□□ -1.72
PrkdcP97313 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm24940-201ENSMUST00000158326 108 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm24860-201ENSMUST00000158457 276 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm27004-201ENSMUST00000183300 727 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm6068-201ENSMUST00000222270 387 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC4.32□□□□□ -1.72
PrkdcP97313 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm36930-201ENSMUST00000195431 2376 ntBASIC4.32□□□□□ -1.72
PrkdcP97313 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC4.32□□□□□ -1.72
PrkdcP97313 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PrkdcP97313 Gm22499-201ENSMUST00000104501 135 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms