Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC9.99□□□□□ -0.81
Cux1P53564 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Cux1P53564 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Gm14356-201ENSMUST00000118322 869 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Gm13430-201ENSMUST00000121366 288 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Gm23030-201ENSMUST00000158004 273 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Gm23662-201ENSMUST00000158046 111 ntBASIC9.99□□□□□ -0.81
Cux1P53564 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Gm2058-201ENSMUST00000178791 560 ntBASIC9.99□□□□□ -0.81
Cux1P53564 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cux1P53564 Gm27219-201ENSMUST00000184633 742 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Gm28080-201ENSMUST00000188552 722 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Gm29160-201ENSMUST00000190094 699 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Gm21524-201ENSMUST00000190499 696 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Gm21715-201ENSMUST00000191056 694 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC9.99□□□□□ -0.81
Cux1P53564 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC9.99□□□□□ -0.81
Cux1P53564 CT025667.1-201ENSMUST00000225872 382 ntBASIC9.99□□□□□ -0.81
Cux1P53564 AC122393.2-201ENSMUST00000226404 1093 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Cux1P53564 Gm9788-201ENSMUST00000057038 906 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Cux1P53564 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Gm42692-201ENSMUST00000199482 2833 ntBASIC9.99□□□□□ -0.81
Cux1P53564 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Cux1P53564 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cux1P53564 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC9.98□□□□□ -0.81
Cux1P53564 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cux1P53564 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Cux1P53564 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cux1P53564 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Cux1P53564 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Cux1P53564 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cux1P53564 Gm13428-201ENSMUST00000117540 365 ntBASIC9.98□□□□□ -0.81
Cux1P53564 Gm24719-201ENSMUST00000157520 110 ntBASIC9.98□□□□□ -0.81
Cux1P53564 Gm6541-201ENSMUST00000165542 561 ntBASIC9.98□□□□□ -0.81
Cux1P53564 Gm7626-201ENSMUST00000195801 353 ntBASIC9.98□□□□□ -0.81
Cux1P53564 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cux1P53564 Gm30694-201ENSMUST00000209278 1230 ntBASIC9.98□□□□□ -0.81
Cux1P53564 Gm9292-201ENSMUST00000222008 710 ntBASIC9.98□□□□□ -0.81
Cux1P53564 Gm36262-201ENSMUST00000223274 499 ntBASIC9.98□□□□□ -0.81
Cux1P53564 AC174797.2-203ENSMUST00000224017 716 ntBASIC9.98□□□□□ -0.81
Cux1P53564 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Cux1P53564 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Cux1P53564 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Cux1P53564 Gm18310-201ENSMUST00000206494 3912 ntBASIC9.98□□□□□ -0.81
Cux1P53564 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC9.98□□□□□ -0.81
Cux1P53564 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cux1P53564 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cux1P53564 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cux1P53564 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Cux1P53564 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC9.98□□□□□ -0.81
Cux1P53564 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cux1P53564 Gm15801-201ENSMUST00000120920 522 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Gm12181-201ENSMUST00000121448 531 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Gm8783-201ENSMUST00000159764 522 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC9.97□□□□□ -0.81
Cux1P53564 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Cux1P53564 Gm37265-201ENSMUST00000191698 885 ntBASIC9.97□□□□□ -0.81
Cux1P53564 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC9.97□□□□□ -0.81
Cux1P53564 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC9.97□□□□□ -0.81
Cux1P53564 Gm45026-201ENSMUST00000205292 833 ntBASIC9.97□□□□□ -0.81
Cux1P53564 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cux1P53564 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cux1P53564 Gm5582-201ENSMUST00000075251 522 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Gm24454-201ENSMUST00000083349 132 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Gm37653-201ENSMUST00000195401 3578 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC9.97□□□□□ -0.81
Cux1P53564 AC131747.2-201ENSMUST00000226121 1895 ntBASIC9.97□□□□□ -0.81
Cux1P53564 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC9.97□□□□□ -0.81
Cux1P53564 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cux1P53564 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC9.97□□□□□ -0.81
Cux1P53564 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.97□□□□□ -0.81
Cux1P53564 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC9.97□□□□□ -0.81
Cux1P53564 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cux1P53564 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Cux1P53564 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms