Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm44705-201ENSMUST00000206719 339 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.16□□□□□ -1.26
Shmt1P50431 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm35619-201ENSMUST00000222548 600 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm22053-201ENSMUST00000083394 200 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm22284-201ENSMUST00000104132 132 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Gm23748-201ENSMUST00000104227 131 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Gm23768-201ENSMUST00000104440 131 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Gm15750-201ENSMUST00000120970 616 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Gm22342-201ENSMUST00000122647 298 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm22223-201ENSMUST00000157360 125 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm5456-201ENSMUST00000170706 844 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Gm17045-201ENSMUST00000178600 844 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm37439-201ENSMUST00000193150 856 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm44374-201ENSMUST00000199821 140 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm32983-201ENSMUST00000208500 505 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 AC116589.9-201ENSMUST00000221462 908 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC7.15□□□□□ -1.26
Shmt1P50431 CU024892.1-201ENSMUST00000224869 515 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Shmt1P50431 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Shmt1P50431 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Shmt1P50431 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
Shmt1P50431 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Shmt1P50431 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.15□□□□□ -1.26
Shmt1P50431 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.15□□□□□ -1.26
Shmt1P50431 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.15□□□□□ -1.27
Shmt1P50431 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Shmt1P50431 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.15□□□□□ -1.27
Shmt1P50431 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
Shmt1P50431 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.15□□□□□ -1.27
Shmt1P50431 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
Shmt1P50431 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Shmt1P50431 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Shmt1P50431 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Shmt1P50431 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Shmt1P50431 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Shmt1P50431 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Shmt1P50431 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Shmt1P50431 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Shmt1P50431 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Shmt1P50431 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.14□□□□□ -1.27
Shmt1P50431 Gm38263-201ENSMUST00000195879 3059 ntBASIC7.14□□□□□ -1.27
Shmt1P50431 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Shmt1P50431 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms