Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rfx1P48377 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Rfx1P48377 AC134860.3-201ENSMUST00000223564 1300 ntBASIC8.47□□□□□ -1.05
Rfx1P48377 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rfx1P48377 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Rfx1P48377 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rfx1P48377 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rfx1P48377 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rfx1P48377 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Rfx1P48377 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rfx1P48377 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Rfx1P48377 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC8.46□□□□□ -1.05
Rfx1P48377 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.46□□□□□ -1.05
Rfx1P48377 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.46□□□□□ -1.05
Rfx1P48377 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Rfx1P48377 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
Rfx1P48377 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.46□□□□□ -1.05
Rfx1P48377 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm25647-201ENSMUST00000101832 78 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm25823-201ENSMUST00000101995 78 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Rfx1P48377 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Rfx1P48377 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm25608-201ENSMUST00000104021 132 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm8858-201ENSMUST00000118259 342 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm15158-201ENSMUST00000120577 570 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm13024-201ENSMUST00000121756 718 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm24241-201ENSMUST00000157787 145 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm25437-201ENSMUST00000158282 132 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm22670-201ENSMUST00000158724 143 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm6245-201ENSMUST00000164699 768 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm24220-201ENSMUST00000177753 79 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm25988-201ENSMUST00000177759 79 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm23471-201ENSMUST00000177886 79 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm26488-201ENSMUST00000178225 79 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm23449-201ENSMUST00000179208 79 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm25221-201ENSMUST00000180051 79 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm5272-201ENSMUST00000182730 982 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm20954-201ENSMUST00000189078 644 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC8.46□□□□□ -1.06
Rfx1P48377 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm36997-201ENSMUST00000195090 707 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm42625-201ENSMUST00000198611 922 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.46□□□□□ -1.06
Rfx1P48377 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm7769-201ENSMUST00000212900 933 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm8290-201ENSMUST00000218202 477 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Gm8137-201ENSMUST00000218997 463 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC8.46□□□□□ -1.06
Rfx1P48377 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 AC154636.3-201ENSMUST00000221489 1214 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 AC132237.2-201ENSMUST00000221702 1209 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Rfx1P48377 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Rfx1P48377 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.46□□□□□ -1.06
Rfx1P48377 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Rfx1P48377 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Rfx1P48377 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Rfx1P48377 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm24462-201ENSMUST00000102430 106 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm23323-201ENSMUST00000104471 133 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm12599-201ENSMUST00000120534 792 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm15644-201ENSMUST00000121764 387 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Mup-ps4-201ENSMUST00000151005 539 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm16558-201ENSMUST00000163015 532 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 Gm17043-201ENSMUST00000164621 1283 ntBASIC8.45□□□□□ -1.06
Rfx1P48377 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Rfx1P48377 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms