Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx2P43241 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx2P43241 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm12099-201ENSMUST00000118660 750 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm13455-201ENSMUST00000118767 517 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm12565-201ENSMUST00000119004 649 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm15194-201ENSMUST00000120453 434 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm22552-201ENSMUST00000157796 337 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm7152-201ENSMUST00000163570 605 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Mir6971-201ENSMUST00000183497 63 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm27460-201ENSMUST00000184213 100 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm36935-201ENSMUST00000192526 292 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Trbv9-201ENSMUST00000194494 290 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm18838-201ENSMUST00000204855 886 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm44705-201ENSMUST00000206719 339 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx2P43241 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx2P43241 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx2P43241 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx2P43241 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx2P43241 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdx2P43241 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm14038-201ENSMUST00000121500 807 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm23071-201ENSMUST00000158242 115 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm23343-201ENSMUST00000158964 143 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Cdx2P43241 Mir199b-201ENSMUST00000175066 110 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Mir7653-201ENSMUST00000184358 61 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm27972-201ENSMUST00000184720 137 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm29197-201ENSMUST00000185922 702 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm29519-201ENSMUST00000186994 398 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm36939-201ENSMUST00000194889 439 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm18467-201ENSMUST00000208805 434 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdx2P43241 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm33312-201ENSMUST00000222443 332 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gm7731-201ENSMUST00000091759 470 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Cdx2P43241 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx2P43241 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx2P43241 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx2P43241 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx2P43241 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.31□□□□□ -1.4
Cdx2P43241 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms