Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.35□□□□□ -1.55
VhlP40338 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 Gm25631-201ENSMUST00000104390 130 ntBASIC5.35□□□□□ -1.55
VhlP40338 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm15621-201ENSMUST00000119162 364 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm11882-201ENSMUST00000121463 506 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm13642-201ENSMUST00000121697 381 ntBASIC5.35□□□□□ -1.55
VhlP40338 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 Gm3760-201ENSMUST00000167475 804 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.35□□□□□ -1.55
VhlP40338 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm26179-201ENSMUST00000177723 132 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm6489-201ENSMUST00000178167 696 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm7463-201ENSMUST00000201541 547 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm44590-201ENSMUST00000206161 391 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm19092-201ENSMUST00000209036 969 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm45100-201ENSMUST00000209153 391 ntBASIC5.35□□□□□ -1.55
VhlP40338 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC5.35□□□□□ -1.55
VhlP40338 Gm6667-201ENSMUST00000217169 564 ntBASIC5.35□□□□□ -1.55
VhlP40338 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.35□□□□□ -1.55
VhlP40338 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 Gm9293-201ENSMUST00000223096 306 ntBASIC5.35□□□□□ -1.55
VhlP40338 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.35□□□□□ -1.55
VhlP40338 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.35□□□□□ -1.55
VhlP40338 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
VhlP40338 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VhlP40338 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VhlP40338 Gm24411-201ENSMUST00000083428 131 ntBASIC5.35□□□□□ -1.55
VhlP40338 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.35□□□□□ -1.55
VhlP40338 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.35□□□□□ -1.55
VhlP40338 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.35□□□□□ -1.55
VhlP40338 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
VhlP40338 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VhlP40338 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VhlP40338 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
VhlP40338 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.35□□□□□ -1.55
VhlP40338 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
VhlP40338 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.34□□□□□ -1.55
VhlP40338 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.34□□□□□ -1.55
VhlP40338 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.34□□□□□ -1.55
VhlP40338 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.34□□□□□ -1.55
VhlP40338 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VhlP40338 Gm24173-201ENSMUST00000104130 128 ntBASIC5.34□□□□□ -1.55
VhlP40338 Gm26416-201ENSMUST00000104280 134 ntBASIC5.34□□□□□ -1.55
VhlP40338 Gm25379-201ENSMUST00000104338 114 ntBASIC5.34□□□□□ -1.55
VhlP40338 Gm13463-201ENSMUST00000119020 233 ntBASIC5.34□□□□□ -1.55
VhlP40338 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.34□□□□□ -1.55
VhlP40338 Gm11925-201ENSMUST00000121375 535 ntBASIC5.34□□□□□ -1.55
VhlP40338 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 Gm22276-201ENSMUST00000122469 129 ntBASIC5.34□□□□□ -1.55
VhlP40338 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
VhlP40338 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC5.34□□□□□ -1.55
VhlP40338 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.34□□□□□ -1.55
VhlP40338 Gm9556-201ENSMUST00000182938 940 ntBASIC5.34□□□□□ -1.55
VhlP40338 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VhlP40338 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.34□□□□□ -1.55
VhlP40338 Gm18849-201ENSMUST00000189861 560 ntBASIC5.34□□□□□ -1.55
VhlP40338 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VhlP40338 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.34□□□□□ -1.55
VhlP40338 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms