Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Cxcl12P40224 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Cxcl12P40224 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Nedd4l-204ENSMUST00000224347 3150 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm7146-201ENSMUST00000116079 739 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm6472-201ENSMUST00000178147 651 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm5947-201ENSMUST00000179156 714 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm5645-201ENSMUST00000179597 714 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm3650-201ENSMUST00000180600 747 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm5119-201ENSMUST00000215858 634 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm46379-201ENSMUST00000222551 265 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm43890-201ENSMUST00000203437 2799 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cxcl12P40224 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Cxcl12P40224 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.81□□□□□ -1.32
Cxcl12P40224 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
Cxcl12P40224 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm12193-201ENSMUST00000117250 379 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
Cxcl12P40224 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm25445-201ENSMUST00000158996 299 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm9597-201ENSMUST00000171913 602 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm22690-201ENSMUST00000175054 110 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm27024-201ENSMUST00000182561 755 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm6931-201ENSMUST00000183103 371 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.8□□□□□ -1.32
Cxcl12P40224 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm42652-201ENSMUST00000199073 614 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.8□□□□□ -1.32
Cxcl12P40224 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Cxcl12P40224 Gm15732-201ENSMUST00000079794 480 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC6.8□□□□□ -1.32
Cxcl12P40224 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 Prkaa1-202ENSMUST00000228218 4618 ntBASIC6.8□□□□□ -1.32
Cxcl12P40224 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cxcl12P40224 AU020206-202ENSMUST00000206358 3009 ntBASIC6.79□□□□□ -1.32
Cxcl12P40224 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cxcl12P40224 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cxcl12P40224 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.79□□□□□ -1.32
Cxcl12P40224 Tmem161b-206ENSMUST00000225069 2414 ntBASIC6.79□□□□□ -1.32
Cxcl12P40224 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cxcl12P40224 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms