Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Gm23891-201ENSMUST00000158114 138 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Gm11107-201ENSMUST00000165414 505 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.76□□□□□ -1.17
Traf1P39428 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.76□□□□□ -1.17
Traf1P39428 Gm8192-201ENSMUST00000182196 958 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Gm27507-201ENSMUST00000184199 93 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Gm21877-201ENSMUST00000185640 694 ntBASIC7.76□□□□□ -1.17
Traf1P39428 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.76□□□□□ -1.17
Traf1P39428 Gm8190-201ENSMUST00000199603 586 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.76□□□□□ -1.17
Traf1P39428 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Traf1P39428 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC7.76□□□□□ -1.17
Traf1P39428 Gm35619-201ENSMUST00000222548 600 ntBASIC7.76□□□□□ -1.17
Traf1P39428 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Gm18955-201ENSMUST00000223173 649 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
Traf1P39428 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Gm22053-201ENSMUST00000083394 200 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Traf1P39428 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Traf1P39428 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.76□□□□□ -1.17
Traf1P39428 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.76□□□□□ -1.17
Traf1P39428 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Traf1P39428 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.75□□□□□ -1.17
Traf1P39428 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Traf1P39428 Gm5319-201ENSMUST00000118965 873 ntBASIC7.75□□□□□ -1.17
Traf1P39428 Gm5793-201ENSMUST00000119393 630 ntBASIC7.75□□□□□ -1.17
Traf1P39428 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.75□□□□□ -1.17
Traf1P39428 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Gm23674-201ENSMUST00000157473 131 ntBASIC7.75□□□□□ -1.17
Traf1P39428 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Traf1P39428 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Gm25675-201ENSMUST00000174979 118 ntBASIC7.75□□□□□ -1.17
Traf1P39428 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.75□□□□□ -1.17
Traf1P39428 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.75□□□□□ -1.17
Traf1P39428 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.75□□□□□ -1.17
Traf1P39428 Gm44705-201ENSMUST00000206719 339 ntBASIC7.75□□□□□ -1.17
Traf1P39428 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.75□□□□□ -1.17
Traf1P39428 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Traf1P39428 Gm26130-201ENSMUST00000083171 138 ntBASIC7.75□□□□□ -1.17
Traf1P39428 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Traf1P39428 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Traf1P39428 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.75□□□□□ -1.17
Traf1P39428 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.75□□□□□ -1.17
Traf1P39428 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Traf1P39428 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Traf1P39428 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.75□□□□□ -1.17
Traf1P39428 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Traf1P39428 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Traf1P39428 Gm37023-201ENSMUST00000192895 2426 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Traf1P39428 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Gm13176-201ENSMUST00000117910 477 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Gm15164-201ENSMUST00000122203 271 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Mir1900-201ENSMUST00000122714 78 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Traf1P39428 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Traf1P39428 Gm21614-201ENSMUST00000183260 1005 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Traf1P39428 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.74□□□□□ -1.17
Traf1P39428 Gm37189-201ENSMUST00000192131 298 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Gm43576-201ENSMUST00000197937 871 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Gm45122-201ENSMUST00000206376 784 ntBASIC7.74□□□□□ -1.17
Traf1P39428 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.74□□□□□ -1.17
Traf1P39428 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.74□□□□□ -1.17
Traf1P39428 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Traf1P39428 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms