Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BdnfP21237 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BdnfP21237 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BdnfP21237 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
BdnfP21237 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.6□□□□□ -1.35
BdnfP21237 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.6□□□□□ -1.35
BdnfP21237 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
BdnfP21237 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BdnfP21237 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
BdnfP21237 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
BdnfP21237 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
BdnfP21237 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.59□□□□□ -1.35
BdnfP21237 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.59□□□□□ -1.35
BdnfP21237 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Gm14550-201ENSMUST00000117918 407 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm11865-201ENSMUST00000118093 859 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm3931-201ENSMUST00000119038 455 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm12944-201ENSMUST00000119262 463 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm4910-201ENSMUST00000119605 366 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm8916-201ENSMUST00000119732 949 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm9435-201ENSMUST00000120379 877 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm15786-201ENSMUST00000121079 450 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.59□□□□□ -1.35
BdnfP21237 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC6.59□□□□□ -1.35
BdnfP21237 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Gm3208-201ENSMUST00000168281 427 ntBASIC6.59□□□□□ -1.35
BdnfP21237 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Mir7011-201ENSMUST00000183768 73 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm28665-201ENSMUST00000189269 670 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.59□□□□□ -1.35
BdnfP21237 Gm5575-201ENSMUST00000190879 398 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm8101-201ENSMUST00000192796 478 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.59□□□□□ -1.35
BdnfP21237 AC172027.1-201ENSMUST00000217659 337 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm19217-201ENSMUST00000218238 328 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.59□□□□□ -1.35
BdnfP21237 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Gm9315-201ENSMUST00000222696 908 ntBASIC6.59□□□□□ -1.35
BdnfP21237 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.59□□□□□ -1.35
BdnfP21237 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.59□□□□□ -1.35
BdnfP21237 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.59□□□□□ -1.35
BdnfP21237 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.59□□□□□ -1.35
BdnfP21237 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
BdnfP21237 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
BdnfP21237 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.59□□□□□ -1.35
BdnfP21237 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Gm17199-201ENSMUST00000097296 416 ntBASIC6.59□□□□□ -1.35
BdnfP21237 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
BdnfP21237 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.59□□□□□ -1.35
BdnfP21237 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
BdnfP21237 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
BdnfP21237 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BdnfP21237 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.59□□□□□ -1.36
BdnfP21237 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.59□□□□□ -1.36
BdnfP21237 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.59□□□□□ -1.36
BdnfP21237 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
BdnfP21237 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BdnfP21237 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
BdnfP21237 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.58□□□□□ -1.36
BdnfP21237 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BdnfP21237 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
BdnfP21237 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
BdnfP21237 Gm38368-201ENSMUST00000193181 1335 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
BdnfP21237 Gm24142-201ENSMUST00000101960 107 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Gm22470-201ENSMUST00000104117 130 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BdnfP21237 Gm8644-201ENSMUST00000118619 596 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Gm15484-201ENSMUST00000118871 828 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Gm14957-201ENSMUST00000121069 817 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Mir1907-201ENSMUST00000122509 90 ntBASIC6.58□□□□□ -1.36
BdnfP21237 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BdnfP21237 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.58□□□□□ -1.36
BdnfP21237 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BdnfP21237 Mir6357-201ENSMUST00000184246 104 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Gm18501-201ENSMUST00000185363 664 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Gm28070-201ENSMUST00000191502 445 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.58□□□□□ -1.36
BdnfP21237 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.58□□□□□ -1.36
BdnfP21237 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms