Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Mir486-201ENSMUST00000093576 128 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm5386-201ENSMUST00000121749 2450 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm16465-201ENSMUST00000118585 1758 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Pla2g4c-203ENSMUST00000108528 3390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Cnot2-202ENSMUST00000105265 2268 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm26002-201ENSMUST00000101915 107 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm26344-201ENSMUST00000104553 132 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Lipe-203ENSMUST00000105177 1251 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm7146-201ENSMUST00000116079 739 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm14506-201ENSMUST00000121165 536 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm11363-201ENSMUST00000121672 548 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm13409-201ENSMUST00000122072 546 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.42□□□□□ -1.38
Hoxd3P09027 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm7094-201ENSMUST00000178379 366 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm27313-201ENSMUST00000183500 142 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm28016-201ENSMUST00000184594 196 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm37828-201ENSMUST00000192496 432 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm37119-201ENSMUST00000195691 389 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Hoxd3P09027 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm46994-201ENSMUST00000221523 219 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 AC159263.2-201ENSMUST00000221593 411 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 AC167019.4-201ENSMUST00000226494 1070 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 AC168062.2-201ENSMUST00000228907 422 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Spdye4b-201ENSMUST00000031574 2165 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm38404-201ENSMUST00000202005 2496 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms