Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm7442-201ENSMUST00000197778 383 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm42824-201ENSMUST00000199361 247 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm23786-202ENSMUST00000200181 119 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm44404-201ENSMUST00000203979 636 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm44135-201ENSMUST00000205221 368 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm20074-201ENSMUST00000208144 484 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm42402-201ENSMUST00000208341 1054 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm2734-201ENSMUST00000208561 743 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm8689-201ENSMUST00000218709 712 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 AC167202.2-201ENSMUST00000220155 296 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 AC154767.1-201ENSMUST00000224669 358 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 CT010480.5-201ENSMUST00000225026 217 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 CT009515.1-201ENSMUST00000228127 586 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm43322-201ENSMUST00000196232 1612 ntBASIC7.56□□□□□ -1.2
Trim42Q9D2H5 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gzmk-202ENSMUST00000122399 1304 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm43062-201ENSMUST00000196302 1319 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 n-R5s51-201ENSMUST00000104473 123 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm14036-201ENSMUST00000118248 480 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm14007-201ENSMUST00000118288 210 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm11798-201ENSMUST00000119150 421 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm7571-201ENSMUST00000120252 927 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm13484-201ENSMUST00000120738 412 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm14826-201ENSMUST00000121284 901 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm9458-201ENSMUST00000135273 727 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm22202-201ENSMUST00000158608 311 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm17157-201ENSMUST00000172397 348 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm23187-201ENSMUST00000175746 86 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm5473-201ENSMUST00000179326 642 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm26652-202ENSMUST00000181672 475 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm8529-201ENSMUST00000183298 745 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm17828-201ENSMUST00000183380 799 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm29356-201ENSMUST00000186935 373 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm29263-201ENSMUST00000188718 463 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm29195-201ENSMUST00000189038 379 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm18599-201ENSMUST00000206729 1125 ntBASIC7.55□□□□□ -1.2
Trim42Q9D2H5 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms