Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm26959-201ENSMUST00000182376 978 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm29492-201ENSMUST00000187124 457 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm9710-201ENSMUST00000198053 499 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm2860-201ENSMUST00000199226 707 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm42804-201ENSMUST00000199701 178 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm4928-201ENSMUST00000219622 850 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 CT954323.2-201ENSMUST00000222056 213 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 AC133598.2-201ENSMUST00000224302 624 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 A1cf-203ENSMUST00000224400 1204 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 AC154323.1-201ENSMUST00000228329 1231 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.27□□□□□ -1.25
Ddx56Q9D0R4 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm38325-201ENSMUST00000194507 1377 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Mir1929-201ENSMUST00000158635 93 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm24756-201ENSMUST00000177002 96 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm9167-201ENSMUST00000182469 962 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Dlx6os1-204ENSMUST00000184182 146 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm28580-201ENSMUST00000186767 88 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm42625-201ENSMUST00000198611 922 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm19056-201ENSMUST00000218220 797 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm24451-201ENSMUST00000083353 133 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.26□□□□□ -1.25
Ddx56Q9D0R4 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm26419-201ENSMUST00000104272 133 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm17184-201ENSMUST00000111864 462 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm12104-201ENSMUST00000120359 979 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm12181-201ENSMUST00000121448 531 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm16359-201ENSMUST00000124511 289 ntBASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ddx56Q9D0R4 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms