Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm25546-201ENSMUST00000103977 132 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm7091-201ENSMUST00000116438 586 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm10157-201ENSMUST00000139408 343 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm25277-201ENSMUST00000157266 324 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm16113-201ENSMUST00000159629 372 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm20549-201ENSMUST00000174804 429 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm25640-201ENSMUST00000175378 125 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm4308-201ENSMUST00000179735 914 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm2767-201ENSMUST00000209582 473 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Use1Q9CQ56 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm25189-201ENSMUST00000083911 164 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Mir455-201ENSMUST00000093594 82 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.18□□□□□ -1.42
Use1Q9CQ56 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Use1Q9CQ56 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Use1Q9CQ56 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm22781-201ENSMUST00000104083 137 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm5387-201ENSMUST00000119776 857 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm11545-201ENSMUST00000146507 375 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm22214-201ENSMUST00000157563 172 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm26381-201ENSMUST00000174895 92 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28739-201ENSMUST00000185415 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28219-201ENSMUST00000185452 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28542-201ENSMUST00000185545 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28303-201ENSMUST00000185642 747 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm29244-201ENSMUST00000185825 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm29437-201ENSMUST00000185865 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm29412-201ENSMUST00000185869 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28910-201ENSMUST00000185921 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28812-201ENSMUST00000185963 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm29468-201ENSMUST00000185978 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28335-201ENSMUST00000186204 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28854-201ENSMUST00000186218 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28636-201ENSMUST00000186353 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28452-201ENSMUST00000186623 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm29298-201ENSMUST00000186704 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28185-201ENSMUST00000186815 694 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28227-201ENSMUST00000186862 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm28796-201ENSMUST00000186905 696 ntBASIC6.17□□□□□ -1.42
Use1Q9CQ56 Gm29659-201ENSMUST00000187063 696 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms