Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.53□□□□□ -1.36
Msh4Q99MT2 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Msh4Q99MT2 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Msh4Q99MT2 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Msh4Q99MT2 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm2178-201ENSMUST00000104927 357 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm13732-201ENSMUST00000117753 535 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm14550-201ENSMUST00000117918 407 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm11581-201ENSMUST00000122024 763 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm22226-201ENSMUST00000157355 109 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm6264-201ENSMUST00000160802 624 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm28665-201ENSMUST00000189269 670 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm44342-201ENSMUST00000196874 129 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm44383-201ENSMUST00000198940 129 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm20177-201ENSMUST00000203705 334 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 AC134439.2-201ENSMUST00000221950 467 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Prl7a1-203ENSMUST00000224852 1283 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Msh4Q99MT2 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Msh4Q99MT2 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.52□□□□□ -1.37
Msh4Q99MT2 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm25724-201ENSMUST00000104531 117 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm6987-201ENSMUST00000119319 428 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm11796-201ENSMUST00000120208 972 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm7571-201ENSMUST00000120252 927 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm14070-201ENSMUST00000120773 428 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm13460-201ENSMUST00000121274 353 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm14353-201ENSMUST00000122200 869 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm8577-201ENSMUST00000122420 986 ntBASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.51□□□□□ -1.37
Msh4Q99MT2 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms