Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf1Q99LC2 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.74□□□□□ -1.33
Cstf1Q99LC2 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf1Q99LC2 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cstf1Q99LC2 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm11504-201ENSMUST00000120211 173 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm9167-201ENSMUST00000182469 962 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm42580-201ENSMUST00000197223 753 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm43382-201ENSMUST00000198954 838 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm31861-201ENSMUST00000204563 672 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm3266-201ENSMUST00000217832 591 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm23456-201ENSMUST00000083335 137 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm22865-201ENSMUST00000083949 214 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.73□□□□□ -1.33
Cstf1Q99LC2 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cstf1Q99LC2 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm13489-201ENSMUST00000121234 971 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm15257-201ENSMUST00000177680 883 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm15252-201ENSMUST00000177750 883 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm15256-201ENSMUST00000177793 883 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm15260-201ENSMUST00000179402 883 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Mir7008-201ENSMUST00000184398 63 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm45448-201ENSMUST00000211739 209 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm19195-201ENSMUST00000222018 511 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms