Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm38263-201ENSMUST00000195879 3059 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 AC154806.2-201ENSMUST00000227212 2385 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm14733-201ENSMUST00000117680 133 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm11498-201ENSMUST00000120660 949 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm23071-201ENSMUST00000158242 115 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm28023-201ENSMUST00000184556 60 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm27825-201ENSMUST00000184586 60 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm29605-201ENSMUST00000190800 292 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm37883-201ENSMUST00000194970 725 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm42799-201ENSMUST00000201331 328 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 AC102676.1-201ENSMUST00000228131 719 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.95□□□□□ -1.14
Brf1Q8CFK2 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm24048-201ENSMUST00000102411 106 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm16073-201ENSMUST00000116032 517 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm11318-201ENSMUST00000118640 961 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm13207-201ENSMUST00000119862 773 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm14614-201ENSMUST00000119873 384 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm11504-201ENSMUST00000120211 173 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm2058-201ENSMUST00000178791 560 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm26607-201ENSMUST00000180661 867 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Ighv1-73-201ENSMUST00000197435 352 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm43576-201ENSMUST00000197937 871 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm5324-201ENSMUST00000208115 476 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 AC154640.3-201ENSMUST00000227492 846 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm21731-201ENSMUST00000079524 489 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm24405-201ENSMUST00000083033 167 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms