Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm6754-201ENSMUST00000117124 913 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm14279-201ENSMUST00000117142 332 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm10243-201ENSMUST00000117571 333 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm13486-201ENSMUST00000119910 282 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm23757-201ENSMUST00000158353 100 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm22948-201ENSMUST00000158561 243 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm26381-201ENSMUST00000174895 92 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm21392-201ENSMUST00000182950 972 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm6610-201ENSMUST00000186324 358 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm9293-201ENSMUST00000223096 306 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm7493-201ENSMUST00000085919 626 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm10247-201ENSMUST00000090395 333 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28bQ8CEG5 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm6746-201ENSMUST00000108774 483 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm6490-201ENSMUST00000111862 461 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm11865-201ENSMUST00000118093 859 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm12242-201ENSMUST00000118824 738 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm8506-201ENSMUST00000186661 829 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm18940-201ENSMUST00000222518 871 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Gm10540-201ENSMUST00000097581 276 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc28bQ8CEG5 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms