Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.71□□□□□ -1.33
Trub1Q8C0D0 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.71□□□□□ -1.33
Trub1Q8C0D0 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Rnu11-201ENSMUST00000104135 134 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm5387-201ENSMUST00000119776 857 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm12540-201ENSMUST00000121938 319 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm14847-201ENSMUST00000121978 519 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm23888-201ENSMUST00000122690 253 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm25281-201ENSMUST00000157270 104 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm23632-201ENSMUST00000175289 125 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm10136-201ENSMUST00000183196 435 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm27804-201ENSMUST00000185135 119 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm18447-201ENSMUST00000187501 307 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm29156-201ENSMUST00000187764 499 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm38068-201ENSMUST00000192546 540 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 AU020206-202ENSMUST00000206358 3009 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trub1Q8C0D0 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm12874-201ENSMUST00000117190 913 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm25550-201ENSMUST00000158079 128 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm37376-201ENSMUST00000192176 453 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm18586-201ENSMUST00000217265 518 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm9267-201ENSMUST00000222831 404 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm5436-201ENSMUST00000058103 643 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms