Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Usp47Q8BY87 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Usp47Q8BY87 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Usp47Q8BY87 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Usp47Q8BY87 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Usp47Q8BY87 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Usp47Q8BY87 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Gm19210-201ENSMUST00000199562 1350 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Gm11545-201ENSMUST00000146507 375 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Gm25374-201ENSMUST00000158158 101 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Mir6337-201ENSMUST00000184194 105 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Gm27998-201ENSMUST00000184902 361 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Gm18700-201ENSMUST00000185791 553 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Gm43748-201ENSMUST00000202329 1233 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Gm18103-201ENSMUST00000216621 779 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 AC131029.2-201ENSMUST00000226696 628 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Gm24405-201ENSMUST00000083033 167 ntBASIC9.21□□□□□ -0.94
Usp47Q8BY87 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Usp47Q8BY87 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 AC140280.1-201ENSMUST00000227826 1847 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm12937-201ENSMUST00000118333 448 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm16511-201ENSMUST00000120019 564 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm12438-201ENSMUST00000122034 336 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm37770-201ENSMUST00000192855 772 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm43354-201ENSMUST00000196862 346 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Usp47Q8BY87 n-R5s58-201ENSMUST00000093682 119 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 AC105407.2-205ENSMUST00000224680 2733 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 AC122305.1-201ENSMUST00000214803 3921 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Usp47Q8BY87 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC9.2□□□□□ -0.94
Usp47Q8BY87 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm26289-201ENSMUST00000104169 131 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm7058-201ENSMUST00000119209 902 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm28885-201ENSMUST00000185615 563 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm29385-201ENSMUST00000186831 363 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm28918-201ENSMUST00000188822 699 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm28586-201ENSMUST00000189857 456 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm8869-201ENSMUST00000195222 947 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm45127-201ENSMUST00000205984 1015 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 AC154250.1-201ENSMUST00000224775 489 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm43719-201ENSMUST00000200088 2199 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 AC098728.1-202ENSMUST00000226656 2198 ntBASIC9.19□□□□□ -0.94
Usp47Q8BY87 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Usp47Q8BY87 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms