Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Malat1-201ENSMUST00000172812 6983 ntBASIC8.59□□□□□ -1.03
Rnf20Q5DTM8 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 AC130831.1-201ENSMUST00000224546 1474 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm13525-201ENSMUST00000120607 478 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm14122-201ENSMUST00000122076 973 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm2709-201ENSMUST00000142979 350 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm25839-201ENSMUST00000158921 103 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Samd15-201ENSMUST00000169669 1194 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Zfp950-206ENSMUST00000178819 171 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm27373-201ENSMUST00000184017 184 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm6445-201ENSMUST00000189515 1112 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm37977-201ENSMUST00000193096 721 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm37871-201ENSMUST00000194973 688 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm43556-201ENSMUST00000196186 681 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm19170-201ENSMUST00000212440 1084 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 AC154450.1-201ENSMUST00000220911 485 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 AC154738.2-201ENSMUST00000227403 1110 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 AC139845.2-201ENSMUST00000227504 436 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm9800-201ENSMUST00000052615 336 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.58□□□□□ -1.04
Rnf20Q5DTM8 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm37114-201ENSMUST00000195065 1804 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm38029-201ENSMUST00000192669 2090 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Mir546-201ENSMUST00000102105 121 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm25614-201ENSMUST00000104013 133 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm22671-201ENSMUST00000104420 134 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm12090-201ENSMUST00000118692 758 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm12313-201ENSMUST00000121347 421 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm22132-201ENSMUST00000175316 100 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm21430-201ENSMUST00000182998 998 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm3103-201ENSMUST00000198073 752 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm8891-201ENSMUST00000198546 832 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm42164-201ENSMUST00000198881 379 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm43812-202ENSMUST00000202701 581 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 Gm8616-201ENSMUST00000222175 1037 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 AV026068-229ENSMUST00000225516 595 ntBASIC8.57□□□□□ -1.04
Rnf20Q5DTM8 AC146601.1-201ENSMUST00000227910 905 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms