Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm23050-201ENSMUST00000158775 165 ntBASIC8.09□□□□□ -1.11
Shank3Q4ACU6 Gm26057-201ENSMUST00000178099 165 ntBASIC8.09□□□□□ -1.11
Shank3Q4ACU6 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shank3Q4ACU6 Gm45032-201ENSMUST00000205375 520 ntBASIC8.09□□□□□ -1.11
Shank3Q4ACU6 Gm2996-201ENSMUST00000211398 537 ntBASIC8.09□□□□□ -1.11
Shank3Q4ACU6 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC8.09□□□□□ -1.11
Shank3Q4ACU6 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC8.09□□□□□ -1.11
Shank3Q4ACU6 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Shank3Q4ACU6 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Shank3Q4ACU6 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Shank3Q4ACU6 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Gm37951-201ENSMUST00000192963 3032 ntBASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Gm42940-201ENSMUST00000200361 2362 ntBASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Gm8317-201ENSMUST00000121261 471 ntBASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Gm6472-201ENSMUST00000178147 651 ntBASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Mir6926-201ENSMUST00000184562 68 ntBASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Gm29160-201ENSMUST00000190094 699 ntBASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Shank3Q4ACU6 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm5073-201ENSMUST00000118222 820 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm12937-201ENSMUST00000118333 448 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm22106-201ENSMUST00000122544 127 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm22277-201ENSMUST00000157204 277 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm3715-201ENSMUST00000172308 617 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 AC122251.2-201ENSMUST00000227341 603 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm38036-201ENSMUST00000194586 3564 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm37648-201ENSMUST00000192072 2563 ntBASIC8.07□□□□□ -1.12
Shank3Q4ACU6 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Shank3Q4ACU6 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Gm24989-201ENSMUST00000104461 88 ntBASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Gm13533-201ENSMUST00000121104 177 ntBASIC8.06□□□□□ -1.12
Shank3Q4ACU6 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Gm22094-201ENSMUST00000158976 117 ntBASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Gm7335-201ENSMUST00000172475 373 ntBASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Mir3095-201ENSMUST00000175552 87 ntBASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Gm35013-201ENSMUST00000197218 832 ntBASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Gm5306-201ENSMUST00000203325 757 ntBASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 AC134537.2-201ENSMUST00000217770 575 ntBASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Shank3Q4ACU6 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms