Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm32347-201ENSMUST00000192944 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm38121-201ENSMUST00000193213 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm38035-201ENSMUST00000194427 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm38350-201ENSMUST00000194789 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm37990-201ENSMUST00000195821 696 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm44227-201ENSMUST00000203576 241 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm44225-201ENSMUST00000203582 186 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm7252-201ENSMUST00000223284 456 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trafd1Q3UDK1 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm13754-201ENSMUST00000120486 998 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm14300-201ENSMUST00000120800 946 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm14212-201ENSMUST00000122023 826 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm12929-201ENSMUST00000122406 370 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm25962-201ENSMUST00000157173 168 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm22820-201ENSMUST00000157205 329 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm17149-201ENSMUST00000164712 375 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm9672-201ENSMUST00000166437 425 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29048-201ENSMUST00000185342 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29403-201ENSMUST00000185491 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28234-201ENSMUST00000185657 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28248-201ENSMUST00000186093 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29633-202ENSMUST00000186217 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28829-201ENSMUST00000186231 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28261-201ENSMUST00000186417 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28815-201ENSMUST00000186751 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28608-201ENSMUST00000186860 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28122-201ENSMUST00000187088 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28420-201ENSMUST00000187340 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28106-201ENSMUST00000187640 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28698-201ENSMUST00000187734 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29224-201ENSMUST00000187965 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29189-201ENSMUST00000188018 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29476-201ENSMUST00000188397 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29505-201ENSMUST00000188424 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28125-201ENSMUST00000188470 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29391-201ENSMUST00000188545 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29280-201ENSMUST00000188571 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28349-201ENSMUST00000188590 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29652-201ENSMUST00000188622 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28819-206ENSMUST00000188816 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29079-201ENSMUST00000188875 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28213-201ENSMUST00000189183 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29382-201ENSMUST00000189549 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29377-205ENSMUST00000189603 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28327-201ENSMUST00000189638 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28790-201ENSMUST00000189642 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28907-201ENSMUST00000189700 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29586-207ENSMUST00000189745 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29115-201ENSMUST00000189870 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28366-201ENSMUST00000190147 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29212-201ENSMUST00000190384 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29533-201ENSMUST00000190403 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28162-201ENSMUST00000190545 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm29030-201ENSMUST00000190848 615 ntBASIC6.53□□□□□ -1.36
Trafd1Q3UDK1 Gm28742-201ENSMUST00000191001 615 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms