Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cdx4Q07424 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm44895-201ENSMUST00000206670 1538 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm5084-202ENSMUST00000224064 3609 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm26945-201ENSMUST00000183191 2011 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 CT025566.1-202ENSMUST00000224800 2511 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm44231-201ENSMUST00000204106 4075 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm18594-201ENSMUST00000175733 1403 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm9585-201ENSMUST00000219681 1404 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm22438-201ENSMUST00000104049 132 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm22671-201ENSMUST00000104420 134 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm15105-201ENSMUST00000117777 204 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm11653-201ENSMUST00000119992 1009 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm14728-201ENSMUST00000122196 492 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx4Q07424 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm19807-201ENSMUST00000173971 667 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm27026-201ENSMUST00000183003 892 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC5.43□□□□□ -1.54
Cdx4Q07424 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm28416-201ENSMUST00000188334 292 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm29369-201ENSMUST00000190674 615 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm31123-201ENSMUST00000192094 666 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm38214-201ENSMUST00000192581 988 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm37993-201ENSMUST00000195301 988 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm38079-201ENSMUST00000195603 154 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm21048-201ENSMUST00000202470 1166 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm21054-201ENSMUST00000203981 380 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm5418-201ENSMUST00000206932 528 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm18559-201ENSMUST00000208249 604 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC5.43□□□□□ -1.54
Cdx4Q07424 AL929265.1-201ENSMUST00000213427 125 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 AC069561.2-201ENSMUST00000217596 420 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 AC166830.1-201ENSMUST00000224201 533 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdx4Q07424 n-R5s60-201ENSMUST00000083299 119 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Mir138-2-201ENSMUST00000083578 71 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm37090-201ENSMUST00000195694 4105 ntBASIC5.43□□□□□ -1.54
Cdx4Q07424 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx4Q07424 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Cdx4Q07424 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms