Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Msh6P54276 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 AC126549.1-201ENSMUST00000225044 3687 ntBASIC8.41□□□□□ -1.06
Msh6P54276 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Msh6P54276 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Msh6P54276 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Msh6P54276 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC8.4□□□□□ -1.06
Msh6P54276 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC8.4□□□□□ -1.06
Msh6P54276 Gm23739-201ENSMUST00000102295 108 ntBASIC8.4□□□□□ -1.06
Msh6P54276 Gm22371-201ENSMUST00000104588 130 ntBASIC8.4□□□□□ -1.06
Msh6P54276 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.4□□□□□ -1.06
Msh6P54276 Gm13222-201ENSMUST00000119638 138 ntBASIC8.4□□□□□ -1.06
Msh6P54276 Gm15967-201ENSMUST00000120027 1116 ntBASIC8.4□□□□□ -1.06
Msh6P54276 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC8.4□□□□□ -1.06
Msh6P54276 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 BC049739-201ENSMUST00000202626 660 ntBASIC8.4□□□□□ -1.06
Msh6P54276 Gm44265-201ENSMUST00000203631 465 ntBASIC8.4□□□□□ -1.06
Msh6P54276 Gm44770-201ENSMUST00000205395 1264 ntBASIC8.4□□□□□ -1.06
Msh6P54276 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC8.4□□□□□ -1.06
Msh6P54276 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC8.4□□□□□ -1.06
Msh6P54276 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.4□□□□□ -1.06
Msh6P54276 AC170086.2-201ENSMUST00000224733 803 ntBASIC8.4□□□□□ -1.06
Msh6P54276 AC164426.1-201ENSMUST00000225745 929 ntBASIC8.4□□□□□ -1.06
Msh6P54276 AC168062.1-201ENSMUST00000228048 769 ntBASIC8.4□□□□□ -1.06
Msh6P54276 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Msh6P54276 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Msh6P54276 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Msh6P54276 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Msh6P54276 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Msh6P54276 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Msh6P54276 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.39□□□□□ -1.07
Msh6P54276 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Msh6P54276 Gm12618-201ENSMUST00000121754 483 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm22820-201ENSMUST00000157205 329 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm25433-201ENSMUST00000158283 286 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm21728-201ENSMUST00000188442 695 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm21889-201ENSMUST00000188487 695 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm20932-201ENSMUST00000189115 694 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm21920-201ENSMUST00000190042 695 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm7343-201ENSMUST00000194510 1061 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm43382-201ENSMUST00000198954 838 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm3266-201ENSMUST00000217832 591 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Msh6P54276 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Msh6P54276 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Msh6P54276 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.39□□□□□ -1.07
Msh6P54276 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
Msh6P54276 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC8.39□□□□□ -1.07
Msh6P54276 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Msh6P54276 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.38□□□□□ -1.07
Msh6P54276 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.38□□□□□ -1.07
Msh6P54276 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC8.38□□□□□ -1.07
Msh6P54276 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms