Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm8192-201ENSMUST00000182196 958 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Gm21542-201ENSMUST00000182307 993 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Mir7669-201ENSMUST00000183442 58 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Gm5612-201ENSMUST00000053326 375 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cdx2P43241 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.34□□□□□ -1.39
Cdx2P43241 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Cdx2P43241 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdx2P43241 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdx2P43241 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Cdx2P43241 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.34□□□□□ -1.4
Cdx2P43241 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.4
Cdx2P43241 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cdx2P43241 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cdx2P43241 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
Cdx2P43241 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.34□□□□□ -1.4
Cdx2P43241 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Cdx2P43241 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm44553-201ENSMUST00000206316 2037 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdx2P43241 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdx2P43241 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Cdx2P43241 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm24434-201ENSMUST00000104081 132 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Gm7212-201ENSMUST00000120817 348 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm17366-201ENSMUST00000167629 187 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdx2P43241 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm43354-201ENSMUST00000196862 346 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Gm5853-201ENSMUST00000197183 632 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Gm10416-201ENSMUST00000197379 645 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Gm44265-201ENSMUST00000203631 465 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Gm38840-201ENSMUST00000204716 843 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.33□□□□□ -1.4
Cdx2P43241 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Gm22126-201ENSMUST00000083244 142 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdx2P43241 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdx2P43241 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdx2P43241 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Cdx2P43241 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Cdx2P43241 Gm44996-201ENSMUST00000208787 2980 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.33□□□□□ -1.4
Cdx2P43241 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx2P43241 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx2P43241 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx2P43241 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx2P43241 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.32□□□□□ -1.4
Cdx2P43241 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Cdx2P43241 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms