Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm15786-201ENSMUST00000121079 450 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm6451-201ENSMUST00000121488 717 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm15187-201ENSMUST00000122329 264 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.37□□□□□ -1.55
VhlP40338 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC5.37□□□□□ -1.55
VhlP40338 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VhlP40338 Gm22094-201ENSMUST00000158976 117 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm20691-201ENSMUST00000176889 333 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.37□□□□□ -1.55
VhlP40338 Gm27684-201ENSMUST00000183778 80 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm6472-202ENSMUST00000187973 582 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VhlP40338 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Gm26413-201ENSMUST00000196783 126 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm42752-201ENSMUST00000198394 1106 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm4605-201ENSMUST00000203148 625 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC5.37□□□□□ -1.55
VhlP40338 AC164550.1-201ENSMUST00000217821 1066 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm4796-201ENSMUST00000219802 624 ntBASIC5.37□□□□□ -1.55
VhlP40338 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.37□□□□□ -1.55
VhlP40338 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC5.37□□□□□ -1.55
VhlP40338 Gm21731-201ENSMUST00000079524 489 ntBASIC5.37□□□□□ -1.55
VhlP40338 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.37□□□□□ -1.55
VhlP40338 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VhlP40338 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.37□□□□□ -1.55
VhlP40338 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.37□□□□□ -1.55
VhlP40338 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.37□□□□□ -1.55
VhlP40338 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VhlP40338 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.37□□□□□ -1.55
VhlP40338 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
VhlP40338 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VhlP40338 Mir503-201ENSMUST00000102168 71 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm23748-201ENSMUST00000104227 131 ntBASIC5.36□□□□□ -1.55
VhlP40338 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Gm13604-201ENSMUST00000119332 482 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm13207-201ENSMUST00000119862 773 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm13338-201ENSMUST00000120235 361 ntBASIC5.36□□□□□ -1.55
VhlP40338 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Gm14038-201ENSMUST00000121500 807 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm15242-201ENSMUST00000122459 283 ntBASIC5.36□□□□□ -1.55
VhlP40338 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
VhlP40338 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC5.36□□□□□ -1.55
VhlP40338 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Mir1930-201ENSMUST00000158799 84 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm17022-201ENSMUST00000166415 922 ntBASIC5.36□□□□□ -1.55
VhlP40338 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
VhlP40338 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.36□□□□□ -1.55
VhlP40338 Gm27178-201ENSMUST00000184962 340 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm18501-201ENSMUST00000185363 664 ntBASIC5.36□□□□□ -1.55
VhlP40338 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VhlP40338 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Gm29496-201ENSMUST00000189854 693 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm37103-201ENSMUST00000191830 115 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm43595-201ENSMUST00000196464 1071 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm43147-201ENSMUST00000196944 542 ntBASIC5.36□□□□□ -1.55
VhlP40338 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC5.36□□□□□ -1.55
VhlP40338 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC5.36□□□□□ -1.55
VhlP40338 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Gm4247-201ENSMUST00000211441 1042 ntBASIC5.36□□□□□ -1.55
VhlP40338 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC5.36□□□□□ -1.55
VhlP40338 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.36□□□□□ -1.55
VhlP40338 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.36□□□□□ -1.55
VhlP40338 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Gm46311-201ENSMUST00000217971 203 ntBASIC5.36□□□□□ -1.55
VhlP40338 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.36□□□□□ -1.55
VhlP40338 AC140451.1-201ENSMUST00000227984 737 ntBASIC5.36□□□□□ -1.55
VhlP40338 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.36□□□□□ -1.55
VhlP40338 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VhlP40338 Mir296-201ENSMUST00000083587 79 ntBASIC5.36□□□□□ -1.55
VhlP40338 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.36□□□□□ -1.55
VhlP40338 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VhlP40338 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.36□□□□□ -1.55
VhlP40338 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.36□□□□□ -1.55
VhlP40338 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VhlP40338 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VhlP40338 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms