Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.84□□□□□ -1.31
Cxcl12P40224 Gm18592-201ENSMUST00000221529 276 ntBASIC6.84□□□□□ -1.31
Cxcl12P40224 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.84□□□□□ -1.31
Cxcl12P40224 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.84□□□□□ -1.31
Cxcl12P40224 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.84□□□□□ -1.31
Cxcl12P40224 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cxcl12P40224 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cxcl12P40224 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cxcl12P40224 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cxcl12P40224 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cxcl12P40224 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cxcl12P40224 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cxcl12P40224 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.84□□□□□ -1.31
Cxcl12P40224 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cxcl12P40224 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cxcl12P40224 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.84□□□□□ -1.31
Cxcl12P40224 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cxcl12P40224 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cxcl12P40224 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Cxcl12P40224 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.84□□□□□ -1.32
Cxcl12P40224 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Cxcl12P40224 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
Cxcl12P40224 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm43679-201ENSMUST00000197051 3677 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm38300-201ENSMUST00000194245 1870 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cxcl12P40224 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm12643-201ENSMUST00000116078 374 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm15715-201ENSMUST00000118032 283 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm25459-201ENSMUST00000157953 114 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm23891-201ENSMUST00000158114 138 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm3008-201ENSMUST00000160566 571 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Mir5107-201ENSMUST00000175586 88 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm27219-201ENSMUST00000184633 742 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm28353-201ENSMUST00000186482 570 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm28533-201ENSMUST00000186741 570 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm37380-201ENSMUST00000193752 397 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm43105-201ENSMUST00000202987 459 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm44265-201ENSMUST00000203631 465 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cxcl12P40224 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cxcl12P40224 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cxcl12P40224 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 AC164883.2-201ENSMUST00000227931 3815 ntBASIC6.83□□□□□ -1.32
Cxcl12P40224 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Cxcl12P40224 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Mir700-201ENSMUST00000102169 79 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Cxcl12P40224 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Mir3572-201ENSMUST00000175549 86 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 Mir3090-201ENSMUST00000175597 87 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm29197-201ENSMUST00000185922 702 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm42886-201ENSMUST00000199214 466 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm5886-202ENSMUST00000203957 522 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.82□□□□□ -1.32
Cxcl12P40224 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.82□□□□□ -1.32
Cxcl12P40224 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Cxcl12P40224 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.82□□□□□ -1.32
Cxcl12P40224 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms