Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Traf1P39428 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Traf1P39428 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Traf1P39428 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm13983-201ENSMUST00000118018 865 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Gm12451-201ENSMUST00000121636 633 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Gm13669-201ENSMUST00000122366 457 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.78□□□□□ -1.16
Traf1P39428 Mir1953-201ENSMUST00000157866 89 ntBASIC7.78□□□□□ -1.16
Traf1P39428 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm5456-201ENSMUST00000170706 844 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Mir5617-201ENSMUST00000176786 57 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Gm17045-201ENSMUST00000178600 844 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm28023-201ENSMUST00000184556 60 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Gm27825-201ENSMUST00000184586 60 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm29663-201ENSMUST00000186962 853 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Gm10416-201ENSMUST00000197379 645 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm18586-201ENSMUST00000217265 518 ntBASIC7.78□□□□□ -1.16
Traf1P39428 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.78□□□□□ -1.16
Traf1P39428 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.78□□□□□ -1.16
Traf1P39428 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Traf1P39428 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.78□□□□□ -1.16
Traf1P39428 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Traf1P39428 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.78□□□□□ -1.16
Traf1P39428 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
Traf1P39428 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.77□□□□□ -1.16
Traf1P39428 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Traf1P39428 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.77□□□□□ -1.17
Traf1P39428 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Traf1P39428 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Traf1P39428 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Gm11609-201ENSMUST00000121926 793 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Gm14613-201ENSMUST00000122239 752 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Gm18808-201ENSMUST00000173316 462 ntBASIC7.77□□□□□ -1.17
Traf1P39428 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Traf1P39428 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Traf1P39428 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.77□□□□□ -1.17
Traf1P39428 Gm37191-201ENSMUST00000193346 388 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Gm42673-201ENSMUST00000202676 337 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.77□□□□□ -1.17
Traf1P39428 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC7.77□□□□□ -1.17
Traf1P39428 Gm5080-201ENSMUST00000220341 743 ntBASIC7.77□□□□□ -1.17
Traf1P39428 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Traf1P39428 Gm6575-201ENSMUST00000222946 697 ntBASIC7.77□□□□□ -1.17
Traf1P39428 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.77□□□□□ -1.17
Traf1P39428 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Traf1P39428 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.77□□□□□ -1.17
Traf1P39428 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Traf1P39428 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Traf1P39428 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Traf1P39428 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Traf1P39428 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.77□□□□□ -1.17
Traf1P39428 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Traf1P39428 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Traf1P39428 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.76□□□□□ -1.17
Traf1P39428 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Traf1P39428 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Traf1P39428 Gm23979-201ENSMUST00000104071 128 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Gm24790-201ENSMUST00000104285 132 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.76□□□□□ -1.17
Traf1P39428 Gm15596-201ENSMUST00000121139 784 ntBASIC7.76□□□□□ -1.17
Traf1P39428 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms