Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Gm4559A4IF42 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Gm4559A4IF42 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Gm4559A4IF42 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm45033-201ENSMUST00000206710 3167 ntBASIC1.61□□□□□ -2.15
Gm4559A4IF42 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm38292-201ENSMUST00000192646 3045 ntBASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Immt-201ENSMUST00000064062 2728 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm45426-201ENSMUST00000209393 3672 ntBASIC1.61□□□□□ -2.15
Gm4559A4IF42 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm14324-201ENSMUST00000121358 3051 ntBASIC1.61□□□□□ -2.15
Gm4559A4IF42 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Atg12-201ENSMUST00000035648 2492 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm37984-201ENSMUST00000191641 3733 ntBASIC1.61□□□□□ -2.15
Gm4559A4IF42 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Snhg17-209ENSMUST00000186993 3144 ntBASIC1.61□□□□□ -2.15
Gm4559A4IF42 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm43883-201ENSMUST00000204002 3750 ntBASIC1.61□□□□□ -2.15
Gm4559A4IF42 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm37738-201ENSMUST00000192396 4716 ntBASIC1.61□□□□□ -2.15
Gm4559A4IF42 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Gm38336-201ENSMUST00000193040 2549 ntBASIC1.61□□□□□ -2.15
Gm4559A4IF42 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Gm4559A4IF42 Rnf19a-203ENSMUST00000228358 3452 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms